Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 AC092666.2-201ENST00000613287 246 ntBASIC22.41■■□□□ 1.18
CLIC4Q9Y696 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.41■■□□□ 1.18
CLIC4Q9Y696 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 MIR4758-201ENST00000577688 71 ntBASIC22.4■■□□□ 1.18
CLIC4Q9Y696 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLIC4Q9Y696 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.39■■□□□ 1.18
CLIC4Q9Y696 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.18
CLIC4Q9Y696 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
CLIC4Q9Y696 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.39■■□□□ 1.18
CLIC4Q9Y696 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.17
CLIC4Q9Y696 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 RPS2P52-201ENST00000469610 820 ntBASIC22.38■■□□□ 1.17
CLIC4Q9Y696 AC097658.1-201ENST00000475555 843 ntBASIC22.38■■□□□ 1.17
CLIC4Q9Y696 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 AC083880.1-201ENST00000608266 535 ntBASIC22.38■■□□□ 1.17
CLIC4Q9Y696 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
CLIC4Q9Y696 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.37■■□□□ 1.17
CLIC4Q9Y696 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 AC092368.3-202ENST00000574180 1591 ntBASIC22.37■■□□□ 1.17
CLIC4Q9Y696 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CLIC4Q9Y696 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms