Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 AC016769.1-201ENST00000409132 1010 ntBASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 CNN2P6-201ENST00000439038 900 ntBASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 AC069236.1-201ENST00000604339 616 ntBASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MRPS28Q9Y2Q9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 MIR935-201ENST00000401179 91 ntBASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 DUX4L16-201ENST00000555130 1264 ntBASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 LINC01465-201ENST00000408887 1940 ntBASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.87■□□□□ 0.29
MRPS28Q9Y2Q9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 AL355472.2-201ENST00000422958 438 ntBASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 CYP2T1P-201ENST00000432607 1285 ntBASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 AC008694.1-202ENST00000636953 945 ntBASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MRPS28Q9Y2Q9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms