Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 TMEM179-206ENST00000616017 1645 ntBASIC21.11■□□□□ 0.97
NXF1Q9UBU9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NXF1Q9UBU9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 AC110285.5-201ENST00000611501 352 ntBASIC21.1■□□□□ 0.97
NXF1Q9UBU9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 AFG3L1P-217ENST00000557444 2447 ntBASIC21.1■□□□□ 0.97
NXF1Q9UBU9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NXF1Q9UBU9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 AC133681.1-201ENST00000465482 601 ntBASIC21.09■□□□□ 0.97
NXF1Q9UBU9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NXF1Q9UBU9 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.09■□□□□ 0.97
NXF1Q9UBU9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.08■□□□□ 0.97
NXF1Q9UBU9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
NXF1Q9UBU9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
NXF1Q9UBU9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NXF1Q9UBU9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NXF1Q9UBU9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NXF1Q9UBU9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NXF1Q9UBU9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NXF1Q9UBU9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.08■□□□□ 0.96
NXF1Q9UBU9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NXF1Q9UBU9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms