Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHD7Q9P2D1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 AL671883.3-201ENST00000603274 991 ntBASIC20.93■□□□□ 0.94
CHD7Q9P2D1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 PRSS44-201ENST00000515154 1146 ntBASIC20.93■□□□□ 0.94
CHD7Q9P2D1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.93■□□□□ 0.94
CHD7Q9P2D1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 FBXW4P1-201ENST00000426721 2239 ntBASIC20.92■□□□□ 0.94
CHD7Q9P2D1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 AL023973.1-201ENST00000624619 620 ntBASIC20.92■□□□□ 0.94
CHD7Q9P2D1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.92■□□□□ 0.94
CHD7Q9P2D1 AC116351.2-201ENST00000606540 1585 ntBASIC20.92■□□□□ 0.94
CHD7Q9P2D1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD7Q9P2D1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 MIR3180-1-201ENST00000580374 94 ntBASIC20.91■□□□□ 0.94
CHD7Q9P2D1 MIR3180-3-201ENST00000584616 94 ntBASIC20.91■□□□□ 0.94
CHD7Q9P2D1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 AC011298.2-201ENST00000617989 482 ntBASIC20.91■□□□□ 0.94
CHD7Q9P2D1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 HLA-G-202ENST00000376815 851 ntBASIC20.91■□□□□ 0.94
CHD7Q9P2D1 HLA-G-203ENST00000376818 1127 ntBASIC20.91■□□□□ 0.94
CHD7Q9P2D1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD7Q9P2D1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.9■□□□□ 0.94
CHD7Q9P2D1 HLA-A-209ENST00000638375 975 ntBASIC20.9■□□□□ 0.94
CHD7Q9P2D1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHD7Q9P2D1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.89■□□□□ 0.94
CHD7Q9P2D1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHD7Q9P2D1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHD7Q9P2D1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 Z98882.1-201ENST00000622160 2253 ntBASIC20.89■□□□□ 0.93
CHD7Q9P2D1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.89■□□□□ 0.93
CHD7Q9P2D1 PLK5-205ENST00000642079 1969 ntBASIC20.89■□□□□ 0.93
CHD7Q9P2D1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD7Q9P2D1 ATP5G2P1-201ENST00000433580 426 ntBASIC20.88■□□□□ 0.93
CHD7Q9P2D1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms