Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PHRF1Q9P1Y6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.38■■□□□ 1.81
PHRF1Q9P1Y6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PHRF1Q9P1Y6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PHRF1Q9P1Y6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.38■■□□□ 1.81
PHRF1Q9P1Y6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC26.38■■□□□ 1.81
PHRF1Q9P1Y6 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.38■■□□□ 1.81
PHRF1Q9P1Y6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
PHRF1Q9P1Y6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PHRF1Q9P1Y6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 AL450487.1-201ENST00000426799 995 ntBASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 AP003041.3-201ENST00000527151 707 ntBASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 AC011558.1-201ENST00000623459 338 ntBASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 AC133561.1-201ENST00000568600 2415 ntBASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 AC092720.2-201ENST00000602388 1665 ntBASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 BX119927.1-201ENST00000636596 1552 ntBASIC26.37■■□□□ 1.81
PHRF1Q9P1Y6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 AC130371.2-201ENST00000619443 611 ntBASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 KRT8P8-201ENST00000434750 1448 ntBASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 AC079834.2-201ENST00000609776 1949 ntBASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 CA15P1-201ENST00000481698 905 ntBASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC26.36■■□□□ 1.81
PHRF1Q9P1Y6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PHRF1Q9P1Y6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
PHRF1Q9P1Y6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 AC112907.2-201ENST00000448639 330 ntBASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 CLEC4GP1-201ENST00000596555 870 ntBASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 AC012313.10-201ENST00000623509 926 ntBASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PHRF1Q9P1Y6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PHRF1Q9P1Y6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC26.33■■□□□ 1.8
PHRF1Q9P1Y6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 HOMER2P1-201ENST00000455653 964 ntBASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 AL353719.1-201ENST00000566847 864 ntBASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PHRF1Q9P1Y6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms