Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 AC023511.2-201ENST00000618803 211 ntBASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LRP1BQ9NZR2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 AC104692.2-201ENST00000603054 253 ntBASIC12.52□□□□□ -0.4
LRP1BQ9NZR2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC026310.3-201ENST00000625186 2373 ntBASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC004951.3-201ENST00000418645 1148 ntBASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC012313.10-201ENST00000623509 926 ntBASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 LINC01465-201ENST00000408887 1940 ntBASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 AC092119.3-201ENST00000612618 583 ntBASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRP1BQ9NZR2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 PLK5-205ENST00000642079 1969 ntBASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 ATP5G2P1-201ENST00000433580 426 ntBASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 FEM1AP4-201ENST00000443167 1987 ntBASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 CCR12P-201ENST00000446203 998 ntBASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 GCSHP2-201ENST00000560971 527 ntBASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 AL136038.3-201ENST00000561909 1096 ntBASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 AC116351.2-201ENST00000606540 1585 ntBASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
LRP1BQ9NZR2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.5□□□□□ -0.41
LRP1BQ9NZR2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.5□□□□□ -0.41
LRP1BQ9NZR2 AL353719.1-201ENST00000566847 864 ntBASIC12.5□□□□□ -0.41
LRP1BQ9NZR2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.5□□□□□ -0.41
LRP1BQ9NZR2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms