Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ATAD3AQ9NVI7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATAD3AQ9NVI7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ATAD3AQ9NVI7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.78■□□□□ 0.6
ATAD3AQ9NVI7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 AC004911.1-201ENST00000416316 871 ntBASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 AC080038.1-201ENST00000611274 1154 ntBASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.77■□□□□ 0.6
ATAD3AQ9NVI7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
ATAD3AQ9NVI7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.77■□□□□ 0.59
ATAD3AQ9NVI7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATAD3AQ9NVI7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATAD3AQ9NVI7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATAD3AQ9NVI7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.77■□□□□ 0.59
ATAD3AQ9NVI7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATAD3AQ9NVI7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ATAD3AQ9NVI7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATAD3AQ9NVI7 MKRN4P-201ENST00000444706 1521 ntBASIC18.74■□□□□ 0.59
ATAD3AQ9NVI7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATAD3AQ9NVI7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.74■□□□□ 0.59
ATAD3AQ9NVI7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms