Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 AC124016.1-201ENST00000609552 612 ntBASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRDM9Q9NQV7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 KRASP1-201ENST00000407852 552 ntBASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRDM9Q9NQV7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRDM9Q9NQV7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 AC110285.5-201ENST00000611501 352 ntBASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRDM9Q9NQV7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 NBPF21P-201ENST00000425093 1451 ntBASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 YBX1P10-201ENST00000444752 975 ntBASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 UBE2SP1-201ENST00000450587 669 ntBASIC18.53■□□□□ 0.56
PRDM9Q9NQV7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms