Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBX8Q9HC52 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBX8Q9HC52 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CBX8Q9HC52 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBX8Q9HC52 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBX8Q9HC52 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBX8Q9HC52 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBX8Q9HC52 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.92■■□□□ 1.1
CBX8Q9HC52 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBX8Q9HC52 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBX8Q9HC52 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBX8Q9HC52 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBX8Q9HC52 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.91■■□□□ 1.1
CBX8Q9HC52 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBX8Q9HC52 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CBX8Q9HC52 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.91■■□□□ 1.1
CBX8Q9HC52 KRT19P1-201ENST00000405746 1186 ntBASIC21.91■■□□□ 1.1
CBX8Q9HC52 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.91■■□□□ 1.1
CBX8Q9HC52 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.91■■□□□ 1.1
CBX8Q9HC52 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CBX8Q9HC52 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CBX8Q9HC52 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBX8Q9HC52 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBX8Q9HC52 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CBX8Q9HC52 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CBX8Q9HC52 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CBX8Q9HC52 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.9■■□□□ 1.1
CBX8Q9HC52 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.9■■□□□ 1.1
CBX8Q9HC52 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.9■■□□□ 1.1
CBX8Q9HC52 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.9■■□□□ 1.1
CBX8Q9HC52 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.9■■□□□ 1.1
CBX8Q9HC52 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBX8Q9HC52 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.89■■□□□ 1.1
CBX8Q9HC52 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CBX8Q9HC52 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBX8Q9HC52 AC010536.3-201ENST00000620306 533 ntBASIC21.89■■□□□ 1.09
CBX8Q9HC52 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.89■■□□□ 1.09
CBX8Q9HC52 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CBX8Q9HC52 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CBX8Q9HC52 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CBX8Q9HC52 TEX21P-204ENST00000641479 1693 ntBASIC21.88■■□□□ 1.09
CBX8Q9HC52 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CBX8Q9HC52 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBX8Q9HC52 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CBX8Q9HC52 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CBX8Q9HC52 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.88■■□□□ 1.09
CBX8Q9HC52 AC005837.3-201ENST00000612163 286 ntBASIC21.88■■□□□ 1.09
CBX8Q9HC52 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CBX8Q9HC52 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBX8Q9HC52 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBX8Q9HC52 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBX8Q9HC52 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.88■■□□□ 1.09
CBX8Q9HC52 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBX8Q9HC52 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.88■■□□□ 1.09
CBX8Q9HC52 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.87■■□□□ 1.09
CBX8Q9HC52 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.87■■□□□ 1.09
CBX8Q9HC52 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CBX8Q9HC52 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 MIR638-201ENST00000385237 100 ntBASIC21.87■■□□□ 1.09
CBX8Q9HC52 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.87■■□□□ 1.09
CBX8Q9HC52 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.87■■□□□ 1.09
CBX8Q9HC52 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CBX8Q9HC52 AL162412.1-201ENST00000567129 965 ntBASIC21.87■■□□□ 1.09
CBX8Q9HC52 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.87■■□□□ 1.09
CBX8Q9HC52 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.87■■□□□ 1.09
CBX8Q9HC52 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.87■■□□□ 1.09
CBX8Q9HC52 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBX8Q9HC52 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CBX8Q9HC52 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CBX8Q9HC52 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CBX8Q9HC52 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.86■■□□□ 1.09
CBX8Q9HC52 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.86■■□□□ 1.09
CBX8Q9HC52 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
CBX8Q9HC52 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CBX8Q9HC52 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CBX8Q9HC52 MCRIP2P1-201ENST00000394346 511 ntBASIC21.86■■□□□ 1.09
CBX8Q9HC52 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms