Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC005829.2-201ENST00000571422 1056 ntBASIC20.21■□□□□ 0.83
USP29Q9HBJ7 HLA-B-256ENST00000639848 1089 ntBASIC20.21■□□□□ 0.83
USP29Q9HBJ7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.21■□□□□ 0.83
USP29Q9HBJ7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 AC060766.5-201ENST00000590539 871 ntBASIC20.2■□□□□ 0.82
USP29Q9HBJ7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP29Q9HBJ7 Z82202.1-201ENST00000623446 1880 ntBASIC20.2■□□□□ 0.82
USP29Q9HBJ7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP29Q9HBJ7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
USP29Q9HBJ7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 TFP1-202ENST00000475455 1573 ntBASIC20.17■□□□□ 0.82
USP29Q9HBJ7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 AL158047.1-201ENST00000445918 881 ntBASIC20.17■□□□□ 0.82
USP29Q9HBJ7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 AC073648.6-201ENST00000641589 218 ntBASIC20.17■□□□□ 0.82
USP29Q9HBJ7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
USP29Q9HBJ7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms