Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC008687.6-201ENST00000596318 630 ntBASIC24.77■■□□□ 1.56
CHMP4BQ9H444 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.77■■□□□ 1.56
CHMP4BQ9H444 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP4BQ9H444 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP4BQ9H444 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP4BQ9H444 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP4BQ9H444 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP4BQ9H444 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP4BQ9H444 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHMP4BQ9H444 ID1-201ENST00000376105 1233 ntBASIC24.76■■□□□ 1.55
CHMP4BQ9H444 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CHMP4BQ9H444 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.76■■□□□ 1.55
CHMP4BQ9H444 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 AL355802.2-201ENST00000402069 882 ntBASIC24.75■■□□□ 1.55
CHMP4BQ9H444 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 SOX15-203ENST00000570788 1093 ntBASIC24.75■■□□□ 1.55
CHMP4BQ9H444 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.75■■□□□ 1.55
CHMP4BQ9H444 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHMP4BQ9H444 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 UNC93B4-201ENST00000505679 747 ntBASIC24.74■■□□□ 1.55
CHMP4BQ9H444 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 AP006587.1-201ENST00000534129 1502 ntBASIC24.74■■□□□ 1.55
CHMP4BQ9H444 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CHMP4BQ9H444 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 YBX1P10-201ENST00000444752 975 ntBASIC24.73■■□□□ 1.55
CHMP4BQ9H444 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC24.73■■□□□ 1.55
CHMP4BQ9H444 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms