Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 AC142381.4-202ENST00000563973 229 ntBASIC18.18■□□□□ 0.5
UBQLN3Q9H347 MTDHP1-201ENST00000605323 784 ntBASIC18.18■□□□□ 0.5
UBQLN3Q9H347 AL031963.3-201ENST00000606441 850 ntBASIC18.18■□□□□ 0.5
UBQLN3Q9H347 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 AC066615.1-201ENST00000640911 628 ntBASIC18.18■□□□□ 0.5
UBQLN3Q9H347 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN3Q9H347 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 KRT8P20-201ENST00000423953 1409 ntBASIC18.17■□□□□ 0.5
UBQLN3Q9H347 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 AL359736.2-201ENST00000621992 437 ntBASIC18.17■□□□□ 0.5
UBQLN3Q9H347 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN3Q9H347 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 HLA-G-202ENST00000376815 851 ntBASIC18.16■□□□□ 0.5
UBQLN3Q9H347 HLA-G-203ENST00000376818 1127 ntBASIC18.16■□□□□ 0.5
UBQLN3Q9H347 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 AC087289.5-201ENST00000586076 3175 ntBASIC18.16■□□□□ 0.5
UBQLN3Q9H347 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBQLN3Q9H347 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 RPPH1-201ENST00000516869 333 ntBASIC18.15■□□□□ 0.5
UBQLN3Q9H347 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBQLN3Q9H347 KRT8P17-201ENST00000453110 1448 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms