Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
VPS11Q9H270 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VPS11Q9H270 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 AC068338.2-201ENST00000563278 1430 ntBASIC19.71■□□□□ 0.75
VPS11Q9H270 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VPS11Q9H270 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.71■□□□□ 0.75
VPS11Q9H270 KRT18P68-201ENST00000392293 1000 ntBASIC19.71■□□□□ 0.75
VPS11Q9H270 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
VPS11Q9H270 AC016769.1-201ENST00000409132 1010 ntBASIC19.71■□□□□ 0.75
VPS11Q9H270 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.71■□□□□ 0.75
VPS11Q9H270 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS11Q9H270 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.71■□□□□ 0.75
VPS11Q9H270 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.71■□□□□ 0.75
VPS11Q9H270 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS11Q9H270 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.71■□□□□ 0.75
VPS11Q9H270 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.71■□□□□ 0.75
VPS11Q9H270 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VPS11Q9H270 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VPS11Q9H270 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
VPS11Q9H270 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.7■□□□□ 0.74
VPS11Q9H270 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
VPS11Q9H270 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VPS11Q9H270 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS11Q9H270 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VPS11Q9H270 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.7■□□□□ 0.74
VPS11Q9H270 CNN2P6-201ENST00000439038 900 ntBASIC19.7■□□□□ 0.74
VPS11Q9H270 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VPS11Q9H270 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VPS11Q9H270 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.7■□□□□ 0.74
VPS11Q9H270 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VPS11Q9H270 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
VPS11Q9H270 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VPS11Q9H270 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VPS11Q9H270 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS11Q9H270 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
VPS11Q9H270 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
VPS11Q9H270 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VPS11Q9H270 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VPS11Q9H270 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VPS11Q9H270 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VPS11Q9H270 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 DUX4L16-201ENST00000555130 1264 ntBASIC19.69■□□□□ 0.74
VPS11Q9H270 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.69■□□□□ 0.74
VPS11Q9H270 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.69■□□□□ 0.74
VPS11Q9H270 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.69■□□□□ 0.74
VPS11Q9H270 AC011767.1-201ENST00000617410 1153 ntBASIC19.69■□□□□ 0.74
VPS11Q9H270 MIR6821-201ENST00000617625 74 ntBASIC19.69■□□□□ 0.74
VPS11Q9H270 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS11Q9H270 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VPS11Q9H270 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.69■□□□□ 0.74
VPS11Q9H270 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.69■□□□□ 0.74
VPS11Q9H270 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 AC020763.4-201ENST00000623414 4170 ntBASIC19.69■□□□□ 0.74
VPS11Q9H270 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.69■□□□□ 0.74
VPS11Q9H270 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VPS11Q9H270 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VPS11Q9H270 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms