Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NUCKS1Q9H1E3 AL032819.2-201ENST00000624543 2162 ntBASIC21.26■□□□□ 0.99
NUCKS1Q9H1E3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NUCKS1Q9H1E3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.25■□□□□ 0.99
NUCKS1Q9H1E3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 AC069152.1-201ENST00000438030 544 ntBASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 KRT17P1-201ENST00000399211 1546 ntBASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NUCKS1Q9H1E3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NUCKS1Q9H1E3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 MIR4758-201ENST00000577688 71 ntBASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 AC092118.2-201ENST00000613495 667 ntBASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 AL020996.1-203ENST00000536896 2307 ntBASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NUCKS1Q9H1E3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NUCKS1Q9H1E3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms