Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
POLR2J3Q9H1A7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 AL355472.2-201ENST00000422958 438 ntBASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 MIR5787-201ENST00000611784 55 ntBASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
POLR2J3Q9H1A7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR2J3Q9H1A7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 AC133552.2-202ENST00000575694 574 ntBASIC18.09■□□□□ 0.49
POLR2J3Q9H1A7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms