Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 AC007322.4-201ENST00000509611 723 ntBASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD4Q9H0A8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 AC100791.3-201ENST00000617619 330 ntBASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COMMD4Q9H0A8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 LINC01465-201ENST00000408887 1940 ntBASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 KRT18P61-201ENST00000585825 1298 ntBASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 MFSD11-216ENST00000590393 1141 ntBASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 AC016405.3-201ENST00000607710 860 ntBASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD4Q9H0A8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 KRT18P11-201ENST00000435214 1283 ntBASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.29■□□□□ 0.36
COMMD4Q9H0A8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms