Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 RN7SL471P-201ENST00000580476 299 ntBASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR1EQ9GZS1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 AL023875.1-201ENST00000640777 796 ntBASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.91■□□□□ 0.78
POLR1EQ9GZS1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 NBPF21P-201ENST00000425093 1451 ntBASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
POLR1EQ9GZS1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR1EQ9GZS1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 ABHD17AP1-201ENST00000358206 933 ntBASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 KRASP1-201ENST00000407852 552 ntBASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms