Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCM2Q9BSQ5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 AC098590.1-201ENST00000468126 897 ntBASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 AC110285.5-201ENST00000611501 352 ntBASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 FAM197Y4-202ENST00000622692 608 ntBASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCM2Q9BSQ5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 AL158047.1-201ENST00000445918 881 ntBASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCM2Q9BSQ5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 UBE2SP1-201ENST00000450587 669 ntBASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCM2Q9BSQ5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 AC004264.1-201ENST00000608354 794 ntBASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.29■□□□□ 0.68
CCM2Q9BSQ5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms