Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.31■■□□□ 1.8
ABCA3Q99758 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC26.31■■□□□ 1.8
ABCA3Q99758 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA3Q99758 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA3Q99758 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA3Q99758 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA3Q99758 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA3Q99758 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA3Q99758 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCA3Q99758 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC26.31■■□□□ 1.8
ABCA3Q99758 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
ABCA3Q99758 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA3Q99758 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA3Q99758 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA3Q99758 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA3Q99758 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA3Q99758 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC26.3■■□□□ 1.8
ABCA3Q99758 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
ABCA3Q99758 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC26.3■■□□□ 1.8
ABCA3Q99758 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA3Q99758 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA3Q99758 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA3Q99758 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA3Q99758 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA3Q99758 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA3Q99758 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA3Q99758 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA3Q99758 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCA3Q99758 AP000523.1-201ENST00000398242 1049 ntBASIC26.29■■□□□ 1.8
ABCA3Q99758 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
ABCA3Q99758 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA3Q99758 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
ABCA3Q99758 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA3Q99758 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA3Q99758 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA3Q99758 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
ABCA3Q99758 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
ABCA3Q99758 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
ABCA3Q99758 AP000347.1-202ENST00000435868 847 ntBASIC26.28■■□□□ 1.8
ABCA3Q99758 FDX1P1-201ENST00000449115 551 ntBASIC26.28■■□□□ 1.8
ABCA3Q99758 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA3Q99758 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
ABCA3Q99758 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC26.28■■□□□ 1.8
ABCA3Q99758 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA3Q99758 KRT16P6-202ENST00000425692 1426 ntBASIC26.28■■□□□ 1.8
ABCA3Q99758 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA3Q99758 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA3Q99758 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA3Q99758 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA3Q99758 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA3Q99758 Telomerase-vert.1-201ENST00000363312 438 ntBASIC26.28■■□□□ 1.8
ABCA3Q99758 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC26.28■■□□□ 1.8
ABCA3Q99758 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
ABCA3Q99758 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA3Q99758 KRT8P41-201ENST00000533985 1514 ntBASIC26.27■■□□□ 1.8
ABCA3Q99758 ILF2-202ENST00000368681 726 ntTSL 2 BASIC26.27■■□□□ 1.8
ABCA3Q99758 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA3Q99758 AL645929.1-201ENST00000420084 975 ntBASIC26.27■■□□□ 1.8
ABCA3Q99758 AC111152.3-201ENST00000569699 673 ntBASIC26.27■■□□□ 1.8
ABCA3Q99758 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC26.27■■□□□ 1.8
ABCA3Q99758 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA3Q99758 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA3Q99758 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA3Q99758 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC26.27■■□□□ 1.8
ABCA3Q99758 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
ABCA3Q99758 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA3Q99758 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.26■■□□□ 1.8
ABCA3Q99758 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.8
ABCA3Q99758 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.26■■□□□ 1.8
ABCA3Q99758 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA3Q99758 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA3Q99758 HBZP1-201ENST00000354915 429 ntBASIC26.26■■□□□ 1.79
ABCA3Q99758 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
ABCA3Q99758 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA3Q99758 CKBP1-201ENST00000565489 1086 ntBASIC26.26■■□□□ 1.79
ABCA3Q99758 RN7SL510P-201ENST00000581311 263 ntBASIC26.26■■□□□ 1.79
ABCA3Q99758 BCL10-202ENST00000620248 774 ntTSL 5 BASIC26.26■■□□□ 1.79
ABCA3Q99758 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC26.26■■□□□ 1.79
ABCA3Q99758 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
ABCA3Q99758 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.26■■□□□ 1.79
ABCA3Q99758 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.26■■□□□ 1.79
ABCA3Q99758 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA3Q99758 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC26.25■■□□□ 1.79
ABCA3Q99758 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA3Q99758 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC26.25■■□□□ 1.79
ABCA3Q99758 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC26.25■■□□□ 1.79
ABCA3Q99758 IFNL4P1-201ENST00000607083 540 ntBASIC26.25■■□□□ 1.79
ABCA3Q99758 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
ABCA3Q99758 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC26.25■■□□□ 1.79
ABCA3Q99758 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
ABCA3Q99758 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA3Q99758 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
ABCA3Q99758 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC26.25■■□□□ 1.79
ABCA3Q99758 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC26.25■■□□□ 1.79
ABCA3Q99758 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC26.25■■□□□ 1.79
ABCA3Q99758 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC26.25■■□□□ 1.79
ABCA3Q99758 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.25■■□□□ 1.79
ABCA3Q99758 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA3Q99758 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA3Q99758 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms