Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 SNORA78-201ENST00000459373 127 ntBASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 AC004264.1-201ENST00000608354 794 ntBASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 AC113410.3-201ENST00000623366 203 ntBASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRICKLE1Q96MT3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 YBX1P10-201ENST00000444752 975 ntBASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 AL049637.2-201ENST00000641778 930 ntBASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRICKLE1Q96MT3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PRICKLE1Q96MT3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRICKLE1Q96MT3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 AL135905.2-201ENST00000584934 1404 ntBASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PRICKLE1Q96MT3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 KRT18P16-201ENST00000510337 1294 ntBASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 MIR4497-201ENST00000583208 89 ntBASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 AF186192.3-201ENST00000583427 947 ntBASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 AP001271.2-201ENST00000624018 1556 ntBASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE1Q96MT3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 AC112907.3-201ENST00000577781 2400 ntBASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PRICKLE1Q96MT3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms