Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 AC124016.1-201ENST00000609552 612 ntBASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 AL023875.1-201ENST00000640777 796 ntBASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 KRT8P8-201ENST00000434750 1448 ntBASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTHRC1Q96CG8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.22■□□□□ 0.51
CTHRC1Q96CG8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 AC239809.2-201ENST00000415381 517 ntBASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 TUBB8P6-201ENST00000436895 1288 ntBASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTHRC1Q96CG8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTHRC1Q96CG8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTHRC1Q96CG8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms