Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF34Q969K3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF34Q969K3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF34Q969K3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RNF34Q969K3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RNF34Q969K3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 TFP1-202ENST00000475455 1573 ntBASIC20.52■□□□□ 0.88
RNF34Q969K3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 KRASP1-201ENST00000407852 552 ntBASIC20.52■□□□□ 0.88
RNF34Q969K3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 AL158047.1-201ENST00000445918 881 ntBASIC20.52■□□□□ 0.88
RNF34Q969K3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF34Q969K3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
RNF34Q969K3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF34Q969K3 AC142381.4-202ENST00000563973 229 ntBASIC20.52■□□□□ 0.88
RNF34Q969K3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF34Q969K3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF34Q969K3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF34Q969K3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF34Q969K3 AP006587.1-201ENST00000534129 1502 ntBASIC20.52■□□□□ 0.87
RNF34Q969K3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF34Q969K3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.52■□□□□ 0.87
RNF34Q969K3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF34Q969K3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF34Q969K3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF34Q969K3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF34Q969K3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF34Q969K3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNF34Q969K3 AC073130.3-201ENST00000624389 2278 ntBASIC20.51■□□□□ 0.87
RNF34Q969K3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF34Q969K3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF34Q969K3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF34Q969K3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF34Q969K3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF34Q969K3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
RNF34Q969K3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF34Q969K3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF34Q969K3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF34Q969K3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF34Q969K3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF34Q969K3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF34Q969K3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF34Q969K3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
RNF34Q969K3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RNF34Q969K3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF34Q969K3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF34Q969K3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.5■□□□□ 0.87
RNF34Q969K3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF34Q969K3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF34Q969K3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF34Q969K3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF34Q969K3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.5■□□□□ 0.87
RNF34Q969K3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF34Q969K3 RPPH1-201ENST00000516869 333 ntBASIC20.5■□□□□ 0.87
RNF34Q969K3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF34Q969K3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.5■□□□□ 0.87
RNF34Q969K3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF34Q969K3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF34Q969K3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF34Q969K3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RNF34Q969K3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF34Q969K3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF34Q969K3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF34Q969K3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF34Q969K3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF34Q969K3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF34Q969K3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF34Q969K3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF34Q969K3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
RNF34Q969K3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF34Q969K3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF34Q969K3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF34Q969K3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RNF34Q969K3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.49■□□□□ 0.87
RNF34Q969K3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RNF34Q969K3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF34Q969K3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
RNF34Q969K3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF34Q969K3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.49■□□□□ 0.87
RNF34Q969K3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.49■□□□□ 0.87
RNF34Q969K3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RNF34Q969K3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF34Q969K3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF34Q969K3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms