Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 UNC93B2-201ENST00000285383 730 ntBASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 KSR1P1-201ENST00000446298 240 ntBASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 KRT18P16-201ENST00000510337 1294 ntBASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 AL391422.3-201ENST00000603791 2761 ntBASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 AL691432.2-201ENST00000607222 2038 ntBASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A1Q93050 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 AC099778.1-201ENST00000568593 1911 ntBASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 AC079598.2-202ENST00000546624 1451 ntBASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 NIFKP9-201ENST00000419265 221 ntBASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 AP000525.1-201ENST00000608286 694 ntBASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A1Q93050 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 TUBB8P6-201ENST00000436895 1288 ntBASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A1Q93050 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 KRT16P1-201ENST00000399124 1418 ntBASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.96■■□□□ 1.11
ATP6V0A1Q93050 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms