Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.96■□□□□ 0.95
SHC3Q92529 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHC3Q92529 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SHC3Q92529 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SHC3Q92529 AP006587.1-201ENST00000534129 1502 ntBASIC20.95■□□□□ 0.94
SHC3Q92529 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.95■□□□□ 0.94
SHC3Q92529 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SHC3Q92529 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SHC3Q92529 YBX1P10-201ENST00000444752 975 ntBASIC20.95■□□□□ 0.94
SHC3Q92529 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.95■□□□□ 0.94
SHC3Q92529 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SHC3Q92529 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.95■□□□□ 0.94
SHC3Q92529 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SHC3Q92529 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
SHC3Q92529 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.95■□□□□ 0.94
SHC3Q92529 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
SHC3Q92529 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHC3Q92529 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.95■□□□□ 0.94
SHC3Q92529 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHC3Q92529 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
SHC3Q92529 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SHC3Q92529 RNA5SP413-201ENST00000516373 109 ntBASIC20.94■□□□□ 0.94
SHC3Q92529 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.94■□□□□ 0.94
SHC3Q92529 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.94■□□□□ 0.94
SHC3Q92529 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.94■□□□□ 0.94
SHC3Q92529 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHC3Q92529 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC3Q92529 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC3Q92529 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.93■□□□□ 0.94
SHC3Q92529 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.93■□□□□ 0.94
SHC3Q92529 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SHC3Q92529 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC3Q92529 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC3Q92529 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.93■□□□□ 0.94
SHC3Q92529 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHC3Q92529 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.93■□□□□ 0.94
SHC3Q92529 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC3Q92529 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.93■□□□□ 0.94
SHC3Q92529 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC3Q92529 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHC3Q92529 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SHC3Q92529 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHC3Q92529 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
SHC3Q92529 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SHC3Q92529 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SHC3Q92529 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.92■□□□□ 0.94
SHC3Q92529 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.92■□□□□ 0.94
SHC3Q92529 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.92■□□□□ 0.94
SHC3Q92529 AP003097.1-201ENST00000530657 1135 ntBASIC20.92■□□□□ 0.94
SHC3Q92529 KRT18P6-201ENST00000555540 1265 ntBASIC20.92■□□□□ 0.94
SHC3Q92529 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.92■□□□□ 0.94
SHC3Q92529 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.92■□□□□ 0.94
SHC3Q92529 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.92■□□□□ 0.94
SHC3Q92529 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC3Q92529 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC3Q92529 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHC3Q92529 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC3Q92529 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC3Q92529 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms