Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 AC007952.6-201ENST00000573168 2673 ntBASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 AC003957.1-201ENST00000625108 2673 ntBASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAF3IP1Q8TDR0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 AC116562.4-201ENST00000641316 2276 ntBASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 AC097658.1-201ENST00000475555 843 ntBASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 AC005829.2-201ENST00000571422 1056 ntBASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAF3IP1Q8TDR0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 AC018553.1-201ENST00000616682 1458 ntBASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRAF3IP1Q8TDR0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 AC073210.2-201ENST00000430369 194 ntBASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 AL109923.1-201ENST00000618799 583 ntBASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAF3IP1Q8TDR0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
TRAF3IP1Q8TDR0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms