Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.24■■□□□ 1.47
RTL9Q8NET4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC24.24■■□□□ 1.47
RTL9Q8NET4 AP000692.2-201ENST00000608391 879 ntBASIC24.24■■□□□ 1.47
RTL9Q8NET4 AC130371.2-201ENST00000619443 611 ntBASIC24.24■■□□□ 1.47
RTL9Q8NET4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RTL9Q8NET4 AL162377.1-201ENST00000618844 1793 ntBASIC24.24■■□□□ 1.47
RTL9Q8NET4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
RTL9Q8NET4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
RTL9Q8NET4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL9Q8NET4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTL9Q8NET4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 KRT18P22-201ENST00000402024 1347 ntBASIC24.23■■□□□ 1.47
RTL9Q8NET4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTL9Q8NET4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTL9Q8NET4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTL9Q8NET4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTL9Q8NET4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RTL9Q8NET4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
RTL9Q8NET4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RTL9Q8NET4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTL9Q8NET4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTL9Q8NET4 AC096733.2-201ENST00000609937 1394 ntBASIC24.22■■□□□ 1.47
RTL9Q8NET4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTL9Q8NET4 TSPY14P-201ENST00000303979 915 ntBASIC24.22■■□□□ 1.47
RTL9Q8NET4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
RTL9Q8NET4 SLC25A3P1-201ENST00000443844 931 ntBASIC24.22■■□□□ 1.47
RTL9Q8NET4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.22■■□□□ 1.47
RTL9Q8NET4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.22■■□□□ 1.47
RTL9Q8NET4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.22■■□□□ 1.47
RTL9Q8NET4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.22■■□□□ 1.47
RTL9Q8NET4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RTL9Q8NET4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTL9Q8NET4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTL9Q8NET4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTL9Q8NET4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.21■■□□□ 1.47
RTL9Q8NET4 AC008040.2-201ENST00000461049 708 ntBASIC24.21■■□□□ 1.47
RTL9Q8NET4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.21■■□□□ 1.47
RTL9Q8NET4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.21■■□□□ 1.47
RTL9Q8NET4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.21■■□□□ 1.47
RTL9Q8NET4 C2orf69P3-201ENST00000565542 1120 ntBASIC24.21■■□□□ 1.47
RTL9Q8NET4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.21■■□□□ 1.47
RTL9Q8NET4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTL9Q8NET4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
RTL9Q8NET4 FEM1AP1-201ENST00000431297 1995 ntBASIC24.21■■□□□ 1.47
RTL9Q8NET4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTL9Q8NET4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTL9Q8NET4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RTL9Q8NET4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RTL9Q8NET4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.2■■□□□ 1.47
RTL9Q8NET4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RTL9Q8NET4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.2■■□□□ 1.46
RTL9Q8NET4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
RTL9Q8NET4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.2■■□□□ 1.46
RTL9Q8NET4 AC004951.3-201ENST00000418645 1148 ntBASIC24.2■■□□□ 1.46
RTL9Q8NET4 AC011298.2-201ENST00000617989 482 ntBASIC24.2■■□□□ 1.46
RTL9Q8NET4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.2■■□□□ 1.46
RTL9Q8NET4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.2■■□□□ 1.46
RTL9Q8NET4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
RTL9Q8NET4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
RTL9Q8NET4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
RTL9Q8NET4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
RTL9Q8NET4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RTL9Q8NET4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RTL9Q8NET4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTL9Q8NET4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RTL9Q8NET4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
RTL9Q8NET4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC24.19■■□□□ 1.46
RTL9Q8NET4 AC097488.1-201ENST00000507834 756 ntBASIC24.19■■□□□ 1.46
RTL9Q8NET4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.19■■□□□ 1.46
RTL9Q8NET4 EGLN1P1-201ENST00000531623 762 ntBASIC24.19■■□□□ 1.46
RTL9Q8NET4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RTL9Q8NET4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTL9Q8NET4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTL9Q8NET4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.19■■□□□ 1.46
RTL9Q8NET4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
RTL9Q8NET4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC24.19■■□□□ 1.46
RTL9Q8NET4 AC009237.14-201ENST00000609975 1594 ntBASIC24.19■■□□□ 1.46
RTL9Q8NET4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTL9Q8NET4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.18■■□□□ 1.46
RTL9Q8NET4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.18■■□□□ 1.46
RTL9Q8NET4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.18■■□□□ 1.46
RTL9Q8NET4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.18■■□□□ 1.46
RTL9Q8NET4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.18■■□□□ 1.46
RTL9Q8NET4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RTL9Q8NET4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTL9Q8NET4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RTL9Q8NET4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
RTL9Q8NET4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTL9Q8NET4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms