Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT4Q8N9R6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 RNA5SP413-201ENST00000516373 109 ntBASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT4Q8N9R6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 AP006587.1-201ENST00000534129 1502 ntBASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 POM121L13P-201ENST00000422362 380 ntBASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT4Q8N9R6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 KRT18P6-201ENST00000555540 1265 ntBASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.22■□□□□ 0.51
CDRT4Q8N9R6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms