Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 TUBB8P6-201ENST00000436895 1288 ntBASIC15.35■□□□□ 0.05
C3orf56Q8N813 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.35■□□□□ 0.05
C3orf56Q8N813 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C3orf56Q8N813 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 VENTXP5-201ENST00000523979 775 ntBASIC15.34■□□□□ 0.05
C3orf56Q8N813 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
C3orf56Q8N813 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C3orf56Q8N813 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
C3orf56Q8N813 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.33■□□□□ 0.05
C3orf56Q8N813 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 AC004951.3-201ENST00000418645 1148 ntBASIC15.33■□□□□ 0.04
C3orf56Q8N813 AC007663.1-201ENST00000438948 1240 ntBASIC15.33■□□□□ 0.04
C3orf56Q8N813 TSPY17P-201ENST00000450329 467 ntBASIC15.33■□□□□ 0.04
C3orf56Q8N813 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 AC005332.1-201ENST00000577698 1310 ntBASIC15.33■□□□□ 0.04
C3orf56Q8N813 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C3orf56Q8N813 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
C3orf56Q8N813 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C3orf56Q8N813 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.32■□□□□ 0.04
C3orf56Q8N813 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms