Protein–RNA interactions for Protein: Q8N6F1

CLDN19, Claudin-19, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19Q8N6F1 AP006587.1-201ENST00000534129 1502 ntBASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 TREX1-205ENST00000625293 1783 ntBASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN19Q8N6F1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN19Q8N6F1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 AL023875.1-201ENST00000640777 796 ntBASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CLDN19Q8N6F1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.39■□□□□ 0.7
CLDN19Q8N6F1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN19Q8N6F1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN19Q8N6F1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 RN7SL471P-201ENST00000580476 299 ntBASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN19Q8N6F1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 ABHD17AP1-201ENST00000358206 933 ntBASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 PRKY-204ENST00000533551 1019 ntBASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN19Q8N6F1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms