Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TTC39CQ8N584 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TTC39CQ8N584 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TTC39CQ8N584 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TTC39CQ8N584 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.89■□□□□ 0.93
TTC39CQ8N584 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.89■□□□□ 0.93
TTC39CQ8N584 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
TTC39CQ8N584 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TTC39CQ8N584 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.89■□□□□ 0.93
TTC39CQ8N584 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39CQ8N584 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.89■□□□□ 0.93
TTC39CQ8N584 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39CQ8N584 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39CQ8N584 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39CQ8N584 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39CQ8N584 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TTC39CQ8N584 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 AL359736.2-201ENST00000621992 437 ntBASIC20.88■□□□□ 0.93
TTC39CQ8N584 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TTC39CQ8N584 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC39CQ8N584 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 FAM197Y4-202ENST00000622692 608 ntBASIC20.87■□□□□ 0.93
TTC39CQ8N584 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.87■□□□□ 0.93
TTC39CQ8N584 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC39CQ8N584 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.86■□□□□ 0.93
TTC39CQ8N584 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.86■□□□□ 0.93
TTC39CQ8N584 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.86■□□□□ 0.93
TTC39CQ8N584 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.86■□□□□ 0.93
TTC39CQ8N584 GCSHP5-201ENST00000443090 522 ntBASIC20.86■□□□□ 0.93
TTC39CQ8N584 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.86■□□□□ 0.93
TTC39CQ8N584 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.86■□□□□ 0.93
TTC39CQ8N584 AC142381.4-202ENST00000563973 229 ntBASIC20.86■□□□□ 0.93
TTC39CQ8N584 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.86■□□□□ 0.93
TTC39CQ8N584 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TTC39CQ8N584 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.86■□□□□ 0.93
TTC39CQ8N584 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC39CQ8N584 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.85■□□□□ 0.93
TTC39CQ8N584 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39CQ8N584 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms