Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 RNA5SP413-201ENST00000516373 109 ntBASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 AC008687.6-201ENST00000596318 630 ntBASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC116Q8IYX3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 UNC93B4-201ENST00000505679 747 ntBASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC116Q8IYX3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 UNC93B5-201ENST00000530315 699 ntBASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC116Q8IYX3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 AC116562.4-201ENST00000641316 2276 ntBASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC116Q8IYX3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms