Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AL031432.5-201ENST00000641059 760 ntBASIC28.11■■■□□ 2.09
UBR1Q8IWV7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC28.11■■■□□ 2.09
UBR1Q8IWV7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
UBR1Q8IWV7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC28.1■■■□□ 2.09
UBR1Q8IWV7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
UBR1Q8IWV7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
UBR1Q8IWV7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
UBR1Q8IWV7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
UBR1Q8IWV7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC28.1■■■□□ 2.09
UBR1Q8IWV7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
UBR1Q8IWV7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
UBR1Q8IWV7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 NEK4P2-201ENST00000580004 1012 ntBASIC28.09■■■□□ 2.09
UBR1Q8IWV7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC28.09■■■□□ 2.09
UBR1Q8IWV7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBR1Q8IWV7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.08■■■□□ 2.08
UBR1Q8IWV7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC28.07■■■□□ 2.08
UBR1Q8IWV7 CKBP1-201ENST00000565489 1086 ntBASIC28.06■■■□□ 2.08
UBR1Q8IWV7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
UBR1Q8IWV7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
UBR1Q8IWV7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC28.06■■■□□ 2.08
UBR1Q8IWV7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
UBR1Q8IWV7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
UBR1Q8IWV7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
UBR1Q8IWV7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
UBR1Q8IWV7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC28.06■■■□□ 2.08
UBR1Q8IWV7 KRT8P41-201ENST00000533985 1514 ntBASIC28.06■■■□□ 2.08
UBR1Q8IWV7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
UBR1Q8IWV7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 PLK5-205ENST00000642079 1969 ntBASIC28.05■■■□□ 2.08
UBR1Q8IWV7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC28.05■■■□□ 2.08
UBR1Q8IWV7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 AP000523.1-201ENST00000398242 1049 ntBASIC28.05■■■□□ 2.08
UBR1Q8IWV7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
UBR1Q8IWV7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC28.04■■■□□ 2.08
UBR1Q8IWV7 FDX1P1-201ENST00000449115 551 ntBASIC28.04■■■□□ 2.08
UBR1Q8IWV7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC28.03■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms