Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 AC063952.2-201ENST00000498792 1227 ntBASIC20.81■□□□□ 0.92
RNF135Q8IUD6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 AL157384.1-201ENST00000445995 2473 ntBASIC20.8■□□□□ 0.92
RNF135Q8IUD6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 ECEL1P2-202ENST00000465689 757 ntBASIC20.8■□□□□ 0.92
RNF135Q8IUD6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 AL121906.2-201ENST00000621597 723 ntBASIC20.8■□□□□ 0.92
RNF135Q8IUD6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RNF135Q8IUD6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 KRT16P1-201ENST00000399124 1418 ntBASIC20.79■□□□□ 0.92
RNF135Q8IUD6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 NIFKP9-201ENST00000419265 221 ntBASIC20.79■□□□□ 0.92
RNF135Q8IUD6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 BX664615.1-201ENST00000443558 458 ntBASIC20.79■□□□□ 0.92
RNF135Q8IUD6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 C2orf69P3-201ENST00000565542 1120 ntBASIC20.79■□□□□ 0.92
RNF135Q8IUD6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF135Q8IUD6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF135Q8IUD6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 AC009947.2-201ENST00000444014 672 ntBASIC20.77■□□□□ 0.92
RNF135Q8IUD6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
RNF135Q8IUD6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms