Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.44■□□□□ 0.7
YTHDF3Q7Z739 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 AC027682.1-201ENST00000562846 899 ntBASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
YTHDF3Q7Z739 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 AC141586.5-201ENST00000624546 2050 ntBASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 SERBP1P1-201ENST00000396021 1160 ntBASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
YTHDF3Q7Z739 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 AC010525.1-201ENST00000585559 441 ntBASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
YTHDF3Q7Z739 AC012313.1-201ENST00000593393 3059 ntBASIC19.4■□□□□ 0.7
YTHDF3Q7Z739 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YTHDF3Q7Z739 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
YTHDF3Q7Z739 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
YTHDF3Q7Z739 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
YTHDF3Q7Z739 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YTHDF3Q7Z739 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms