Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 AC005363.2-201ENST00000618631 242 ntBASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI1Q7Z5J4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 ECEL1P2-202ENST00000465689 757 ntBASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 AC022616.7-201ENST00000525383 220 ntBASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 NTF6B-201ENST00000591913 560 ntBASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 PHGDH-210ENST00000641115 1638 ntBASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 AC006011.2-201ENST00000621313 1158 ntBASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAI1Q7Z5J4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 AC004980.1-204ENST00000429707 299 ntBASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 WWOX-216ENST00000569818 525 ntBASIC16.77■□□□□ 0.28
RAI1Q7Z5J4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI1Q7Z5J4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI1Q7Z5J4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI1Q7Z5J4 BX119927.1-201ENST00000636596 1552 ntBASIC16.77■□□□□ 0.27
RAI1Q7Z5J4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI1Q7Z5J4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI1Q7Z5J4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI1Q7Z5J4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAI1Q7Z5J4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 AC097488.1-201ENST00000507834 756 ntBASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 AL391422.3-201ENST00000603791 2761 ntBASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 RCC2P6-201ENST00000526625 1557 ntBASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RAI1Q7Z5J4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms