Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 PNMA6B-201ENST00000538162 1200 ntBASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 AC006557.6-201ENST00000623071 864 ntBASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST2H3AQ71DI3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H3AQ71DI3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 RPS2P52-201ENST00000469610 820 ntBASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HIST2H3AQ71DI3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HIST2H3AQ71DI3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms