Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFWD3Q6PCD5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFWD3Q6PCD5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.47■□□□□ 0.87
RFWD3Q6PCD5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 RPS2P4-201ENST00000476944 856 ntBASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RFWD3Q6PCD5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.45■□□□□ 0.87
RFWD3Q6PCD5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 AL162377.1-201ENST00000618844 1793 ntBASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
RFWD3Q6PCD5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 NBPF21P-201ENST00000425093 1451 ntBASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 Z99916.2-201ENST00000604037 246 ntBASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFWD3Q6PCD5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 AC018553.1-201ENST00000616682 1458 ntBASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFWD3Q6PCD5 AC116351.2-201ENST00000606540 1585 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms