Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 AP000523.1-201ENST00000398242 1049 ntBASIC10.55□□□□□ -0.72
RNF213Q63HN8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 SEC1P-202ENST00000473944 940 ntBASIC10.55□□□□□ -0.72
RNF213Q63HN8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 AC093323.1-202ENST00000635031 2045 ntBASIC10.54□□□□□ -0.72
RNF213Q63HN8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 AC092597.1-201ENST00000487352 616 ntBASIC10.54□□□□□ -0.72
RNF213Q63HN8 AC083906.6-201ENST00000641366 219 ntBASIC10.54□□□□□ -0.72
RNF213Q63HN8 AC079781.4-201ENST00000641908 219 ntBASIC10.54□□□□□ -0.72
RNF213Q63HN8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 AC092068.2-201ENST00000590491 1708 ntBASIC10.54□□□□□ -0.72
RNF213Q63HN8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RNF213Q63HN8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 RNPS1P1-201ENST00000507437 918 ntBASIC10.54□□□□□ -0.72
RNF213Q63HN8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RNF213Q63HN8 AL596442.2-201ENST00000610240 980 ntBASIC10.54□□□□□ -0.72
RNF213Q63HN8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RNF213Q63HN8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 LBH-203ENST00000404397 543 ntTSL 4 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RNF213Q63HN8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RNF213Q63HN8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RNF213Q63HN8 HBZP1-201ENST00000354915 429 ntBASIC10.54□□□□□ -0.72
RNF213Q63HN8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RNF213Q63HN8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.54□□□□□ -0.72
RNF213Q63HN8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 RPS8P6-201ENST00000426177 609 ntBASIC10.53□□□□□ -0.72
RNF213Q63HN8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 BX276092.5-203ENST00000456199 560 ntBASIC10.53□□□□□ -0.72
RNF213Q63HN8 AC112482.1-201ENST00000492080 688 ntBASIC10.53□□□□□ -0.72
RNF213Q63HN8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 TK1-205ENST00000590862 642 ntTSL 3 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC10.53□□□□□ -0.72
RNF213Q63HN8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 DNAJB3-202ENST00000449667 1266 ntBASIC10.53□□□□□ -0.72
RNF213Q63HN8 PAWRP1-201ENST00000451083 565 ntBASIC10.53□□□□□ -0.72
RNF213Q63HN8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.53□□□□□ -0.72
RNF213Q63HN8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 METTL21AP1-201ENST00000438852 635 ntBASIC10.53□□□□□ -0.72
RNF213Q63HN8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
RNF213Q63HN8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RNF213Q63HN8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RNF213Q63HN8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
RNF213Q63HN8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RNF213Q63HN8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
RNF213Q63HN8 PNN-202ENST00000553331 656 ntTSL 3 BASIC10.52□□□□□ -0.72
RNF213Q63HN8 AL136038.4-201ENST00000603606 1261 ntBASIC10.52□□□□□ -0.72
RNF213Q63HN8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC10.52□□□□□ -0.72
RNF213Q63HN8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RNF213Q63HN8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
RNF213Q63HN8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC10.52□□□□□ -0.72
RNF213Q63HN8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 AL031284.1-201ENST00000419297 478 ntBASIC10.52□□□□□ -0.73
RNF213Q63HN8 TSPY22P-201ENST00000427496 604 ntBASIC10.52□□□□□ -0.73
RNF213Q63HN8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.52□□□□□ -0.73
RNF213Q63HN8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms