Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
COL13A1Q5TAT6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
COL13A1Q5TAT6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL13A1Q5TAT6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 KRT18P67-201ENST00000432816 1264 ntBASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 IGHV3-22-201ENST00000520721 359 ntBASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL13A1Q5TAT6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
COL13A1Q5TAT6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 AL162741.1-201ENST00000565563 1558 ntBASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 YBX2P1-201ENST00000394192 760 ntBASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 AC034232.1-201ENST00000506026 1064 ntBASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.22■■□□□ 1.15
COL13A1Q5TAT6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 AC004812.2-201ENST00000611079 2094 ntBASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 TSPY22P-201ENST00000427496 604 ntBASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 AC007274.1-201ENST00000439805 662 ntBASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 AL049840.3-201ENST00000602669 611 ntBASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms