Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.57■■□□□ 1.2
USH1GQ495M9 NUDT16P1-203ENST00000513809 620 ntBASIC22.57■■□□□ 1.2
USH1GQ495M9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.57■■□□□ 1.2
USH1GQ495M9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.57■■□□□ 1.2
USH1GQ495M9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 AP001271.2-201ENST00000624018 1556 ntBASIC22.57■■□□□ 1.2
USH1GQ495M9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.57■■□□□ 1.2
USH1GQ495M9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.57■■□□□ 1.2
USH1GQ495M9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 AC112907.3-201ENST00000577781 2400 ntBASIC22.57■■□□□ 1.2
USH1GQ495M9 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.57■■□□□ 1.2
USH1GQ495M9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USH1GQ495M9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
USH1GQ495M9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
USH1GQ495M9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.56■■□□□ 1.2
USH1GQ495M9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 ECEL1P3-201ENST00000427961 737 ntBASIC22.56■■□□□ 1.2
USH1GQ495M9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.56■■□□□ 1.2
USH1GQ495M9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
USH1GQ495M9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.56■■□□□ 1.2
USH1GQ495M9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.56■■□□□ 1.2
USH1GQ495M9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.56■■□□□ 1.2
USH1GQ495M9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.56■■□□□ 1.2
USH1GQ495M9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.56■■□□□ 1.2
USH1GQ495M9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.56■■□□□ 1.2
USH1GQ495M9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.56■■□□□ 1.2
USH1GQ495M9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USH1GQ495M9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USH1GQ495M9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USH1GQ495M9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.55■■□□□ 1.2
USH1GQ495M9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USH1GQ495M9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
USH1GQ495M9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
USH1GQ495M9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USH1GQ495M9 AC211429.1-201ENST00000415277 523 ntBASIC22.55■■□□□ 1.2
USH1GQ495M9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.55■■□□□ 1.2
USH1GQ495M9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.55■■□□□ 1.2
USH1GQ495M9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.55■■□□□ 1.2
USH1GQ495M9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.55■■□□□ 1.2
USH1GQ495M9 REXO1L10P-201ENST00000615707 1290 ntBASIC22.55■■□□□ 1.2
USH1GQ495M9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USH1GQ495M9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USH1GQ495M9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
USH1GQ495M9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
USH1GQ495M9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USH1GQ495M9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USH1GQ495M9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
USH1GQ495M9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.55■■□□□ 1.2
USH1GQ495M9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.54■■□□□ 1.2
USH1GQ495M9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.54■■□□□ 1.2
USH1GQ495M9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.54■■□□□ 1.2
USH1GQ495M9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.54■■□□□ 1.2
USH1GQ495M9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
USH1GQ495M9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
USH1GQ495M9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.54■■□□□ 1.2
USH1GQ495M9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.53■■□□□ 1.2
USH1GQ495M9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.53■■□□□ 1.2
USH1GQ495M9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.53■■□□□ 1.2
USH1GQ495M9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.53■■□□□ 1.2
USH1GQ495M9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.53■■□□□ 1.2
USH1GQ495M9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.53■■□□□ 1.2
USH1GQ495M9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.53■■□□□ 1.2
USH1GQ495M9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.53■■□□□ 1.2
USH1GQ495M9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USH1GQ495M9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
USH1GQ495M9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms