Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC3A1Q07837 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SLC3A1Q07837 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC3A1Q07837 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC3A1Q07837 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC3A1Q07837 AC243732.1-201ENST00000612648 864 ntBASIC17.62■□□□□ 0.41
SLC3A1Q07837 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC3A1Q07837 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC3A1Q07837 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC3A1Q07837 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC3A1Q07837 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC3A1Q07837 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC3A1Q07837 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.61■□□□□ 0.41
SLC3A1Q07837 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 AC008694.1-202ENST00000636953 945 ntBASIC17.61■□□□□ 0.41
SLC3A1Q07837 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 AC090340.1-201ENST00000620778 4980 ntBASIC17.61■□□□□ 0.41
SLC3A1Q07837 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC3A1Q07837 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC3A1Q07837 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC3A1Q07837 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC3A1Q07837 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC3A1Q07837 CROCCP5-201ENST00000436658 830 ntBASIC17.6■□□□□ 0.41
SLC3A1Q07837 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.6■□□□□ 0.41
SLC3A1Q07837 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SLC3A1Q07837 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC3A1Q07837 AC093503.3-201ENST00000624917 2352 ntBASIC17.6■□□□□ 0.41
SLC3A1Q07837 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC3A1Q07837 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 RBM17P2-201ENST00000616397 1405 ntBASIC17.59■□□□□ 0.41
SLC3A1Q07837 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 GPX1P1-201ENST00000388829 606 ntBASIC17.59■□□□□ 0.41
SLC3A1Q07837 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 AC069236.1-201ENST00000604339 616 ntBASIC17.59■□□□□ 0.41
SLC3A1Q07837 AL121832.2-201ENST00000610979 668 ntBASIC17.59■□□□□ 0.41
SLC3A1Q07837 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC3A1Q07837 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC3A1Q07837 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC3A1Q07837 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC3A1Q07837 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC3A1Q07837 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.58■□□□□ 0.41
SLC3A1Q07837 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms