Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 AC120498.9-201ENST00000339021 3867 ntBASIC18.9■□□□□ 0.62
HMGCS1Q01581 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 RNF165-205ENST00000588679 2904 ntBASIC18.9■□□□□ 0.62
HMGCS1Q01581 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HMGCS1Q01581 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS1Q01581 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS1Q01581 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS1Q01581 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS1Q01581 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS1Q01581 AL032819.2-201ENST00000624543 2162 ntBASIC18.89■□□□□ 0.61
HMGCS1Q01581 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS1Q01581 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCS1Q01581 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS1Q01581 AC116351.2-201ENST00000606540 1585 ntBASIC18.89■□□□□ 0.61
HMGCS1Q01581 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS1Q01581 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HMGCS1Q01581 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCS1Q01581 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCS1Q01581 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCS1Q01581 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCS1Q01581 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.88■□□□□ 0.61
HMGCS1Q01581 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCS1Q01581 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.88■□□□□ 0.61
HMGCS1Q01581 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCS1Q01581 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCS1Q01581 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.88■□□□□ 0.61
HMGCS1Q01581 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS1Q01581 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCS1Q01581 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 NCF1B-203ENST00000435988 1254 ntBASIC18.87■□□□□ 0.61
HMGCS1Q01581 GUSBP6-202ENST00000438529 1198 ntBASIC18.87■□□□□ 0.61
HMGCS1Q01581 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HMGCS1Q01581 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGCS1Q01581 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCS1Q01581 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms