Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.3■□□□□ 0.68
CDKL1Q00532 AL109923.1-201ENST00000618799 583 ntBASIC19.3■□□□□ 0.68
CDKL1Q00532 HLA-B-256ENST00000639848 1089 ntBASIC19.3■□□□□ 0.68
CDKL1Q00532 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKL1Q00532 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKL1Q00532 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.3■□□□□ 0.68
CDKL1Q00532 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDKL1Q00532 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.29■□□□□ 0.68
CDKL1Q00532 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.29■□□□□ 0.68
CDKL1Q00532 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDKL1Q00532 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.29■□□□□ 0.68
CDKL1Q00532 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.29■□□□□ 0.68
CDKL1Q00532 AC090192.1-201ENST00000517740 490 ntBASIC19.29■□□□□ 0.68
CDKL1Q00532 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 AC142086.2-201ENST00000569753 217 ntBASIC19.29■□□□□ 0.68
CDKL1Q00532 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.29■□□□□ 0.68
CDKL1Q00532 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.29■□□□□ 0.68
CDKL1Q00532 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.29■□□□□ 0.68
CDKL1Q00532 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.29■□□□□ 0.68
CDKL1Q00532 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.29■□□□□ 0.68
CDKL1Q00532 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKL1Q00532 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDKL1Q00532 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDKL1Q00532 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL1Q00532 AC116351.2-201ENST00000606540 1585 ntBASIC19.28■□□□□ 0.68
CDKL1Q00532 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CDKL1Q00532 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDKL1Q00532 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDKL1Q00532 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL1Q00532 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CDKL1Q00532 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL1Q00532 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.28■□□□□ 0.68
CDKL1Q00532 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL1Q00532 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.28■□□□□ 0.68
CDKL1Q00532 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKL1Q00532 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.28■□□□□ 0.68
CDKL1Q00532 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.28■□□□□ 0.68
CDKL1Q00532 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.28■□□□□ 0.68
CDKL1Q00532 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKL1Q00532 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDKL1Q00532 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL1Q00532 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.27■□□□□ 0.68
CDKL1Q00532 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
CDKL1Q00532 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.27■□□□□ 0.68
CDKL1Q00532 TREX1-205ENST00000625293 1783 ntBASIC19.27■□□□□ 0.68
CDKL1Q00532 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL1Q00532 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
CDKL1Q00532 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL1Q00532 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.27■□□□□ 0.68
CDKL1Q00532 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL1Q00532 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.27■□□□□ 0.68
CDKL1Q00532 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDKL1Q00532 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.27■□□□□ 0.68
CDKL1Q00532 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.27■□□□□ 0.68
CDKL1Q00532 AL138781.1-201ENST00000566567 1274 ntBASIC19.27■□□□□ 0.68
CDKL1Q00532 AC133041.1-202ENST00000642053 222 ntBASIC19.27■□□□□ 0.68
CDKL1Q00532 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDKL1Q00532 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.27■□□□□ 0.68
CDKL1Q00532 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDKL1Q00532 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDKL1Q00532 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
CDKL1Q00532 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKL1Q00532 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CDKL1Q00532 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKL1Q00532 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms