Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
HIST1H3AP68431 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.16■□□□□ 0.34
HIST1H3AP68431 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HIST1H3AP68431 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.16■□□□□ 0.34
HIST1H3AP68431 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.16■□□□□ 0.34
HIST1H3AP68431 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.16■□□□□ 0.34
HIST1H3AP68431 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H3AP68431 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
HIST1H3AP68431 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.16■□□□□ 0.34
HIST1H3AP68431 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HIST1H3AP68431 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 AC005332.7-201ENST00000614046 2005 ntBASIC17.15■□□□□ 0.34
HIST1H3AP68431 ID1-201ENST00000376105 1233 ntBASIC17.15■□□□□ 0.34
HIST1H3AP68431 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 SOX15-203ENST00000570788 1093 ntBASIC17.15■□□□□ 0.34
HIST1H3AP68431 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 AL121906.2-201ENST00000621597 723 ntBASIC17.15■□□□□ 0.34
HIST1H3AP68431 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H3AP68431 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST1H3AP68431 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HIST1H3AP68431 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HIST1H3AP68431 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.14■□□□□ 0.34
HIST1H3AP68431 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HIST1H3AP68431 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 AL355802.2-201ENST00000402069 882 ntBASIC17.14■□□□□ 0.33
HIST1H3AP68431 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.14■□□□□ 0.33
HIST1H3AP68431 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.14■□□□□ 0.33
HIST1H3AP68431 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HIST1H3AP68431 AC008687.6-201ENST00000596318 630 ntBASIC17.14■□□□□ 0.33
HIST1H3AP68431 AL121829.2-201ENST00000620908 328 ntBASIC17.14■□□□□ 0.33
HIST1H3AP68431 AC007952.6-201ENST00000573168 2673 ntBASIC17.14■□□□□ 0.33
HIST1H3AP68431 AC003957.1-201ENST00000625108 2673 ntBASIC17.14■□□□□ 0.33
HIST1H3AP68431 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.14■□□□□ 0.33
HIST1H3AP68431 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H3AP68431 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 UNC93B4-201ENST00000505679 747 ntBASIC17.13■□□□□ 0.33
HIST1H3AP68431 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H3AP68431 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
HIST1H3AP68431 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms