Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61A1P61619 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61A1P61619 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SEC61A1P61619 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.13■□□□□ 0.33
SEC61A1P61619 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61A1P61619 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SEC61A1P61619 AC116050.2-201ENST00000612102 1779 ntBASIC17.12■□□□□ 0.33
SEC61A1P61619 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.12■□□□□ 0.33
SEC61A1P61619 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.12■□□□□ 0.33
SEC61A1P61619 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.12■□□□□ 0.33
SEC61A1P61619 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.12■□□□□ 0.33
SEC61A1P61619 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SEC61A1P61619 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.12■□□□□ 0.33
SEC61A1P61619 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.12■□□□□ 0.33
SEC61A1P61619 MIR4651-201ENST00000582622 73 ntBASIC17.12■□□□□ 0.33
SEC61A1P61619 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.12■□□□□ 0.33
SEC61A1P61619 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.12■□□□□ 0.33
SEC61A1P61619 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
SEC61A1P61619 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SEC61A1P61619 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 AC125437.2-201ENST00000625180 2167 ntBASIC17.12■□□□□ 0.33
SEC61A1P61619 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEC61A1P61619 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.12■□□□□ 0.33
SEC61A1P61619 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEC61A1P61619 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.11■□□□□ 0.33
SEC61A1P61619 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SEC61A1P61619 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SEC61A1P61619 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.11■□□□□ 0.33
SEC61A1P61619 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEC61A1P61619 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SEC61A1P61619 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEC61A1P61619 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.11■□□□□ 0.33
SEC61A1P61619 DUSP5P2-201ENST00000426873 1033 ntBASIC17.11■□□□□ 0.33
SEC61A1P61619 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.11■□□□□ 0.33
SEC61A1P61619 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.11■□□□□ 0.33
SEC61A1P61619 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SEC61A1P61619 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.11■□□□□ 0.33
SEC61A1P61619 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SEC61A1P61619 CYP2T3P-201ENST00000601990 817 ntBASIC17.11■□□□□ 0.33
SEC61A1P61619 AC083880.1-201ENST00000608266 535 ntBASIC17.11■□□□□ 0.33
SEC61A1P61619 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEC61A1P61619 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.11■□□□□ 0.33
SEC61A1P61619 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEC61A1P61619 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.11■□□□□ 0.33
SEC61A1P61619 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEC61A1P61619 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.11■□□□□ 0.33
SEC61A1P61619 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.1■□□□□ 0.33
SEC61A1P61619 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
SEC61A1P61619 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.1■□□□□ 0.33
SEC61A1P61619 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.1■□□□□ 0.33
SEC61A1P61619 AC005332.7-201ENST00000614046 2005 ntBASIC17.1■□□□□ 0.33
SEC61A1P61619 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 ABHD17AP1-201ENST00000358206 933 ntBASIC17.1■□□□□ 0.33
SEC61A1P61619 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.1■□□□□ 0.33
SEC61A1P61619 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.1■□□□□ 0.33
SEC61A1P61619 LSM12P1-201ENST00000411836 588 ntBASIC17.1■□□□□ 0.33
SEC61A1P61619 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.1■□□□□ 0.33
SEC61A1P61619 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
SEC61A1P61619 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.1■□□□□ 0.33
SEC61A1P61619 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.1■□□□□ 0.33
SEC61A1P61619 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SEC61A1P61619 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.1■□□□□ 0.33
SEC61A1P61619 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SEC61A1P61619 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEC61A1P61619 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 AC093503.3-201ENST00000624917 2352 ntBASIC17.09■□□□□ 0.33
SEC61A1P61619 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEC61A1P61619 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms