Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC009113.1-201ENST00000570267 2443 ntBASIC16.86■□□□□ 0.29
AP3S2P59780 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3S2P59780 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
AP3S2P59780 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
AP3S2P59780 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
AP3S2P59780 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
AP3S2P59780 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.86■□□□□ 0.29
AP3S2P59780 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S2P59780 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3S2P59780 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
AP3S2P59780 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
AP3S2P59780 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
AP3S2P59780 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S2P59780 LTB4R2-202ENST00000528054 3092 ntBASIC16.85■□□□□ 0.29
AP3S2P59780 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3S2P59780 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S2P59780 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.85■□□□□ 0.29
AP3S2P59780 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 IGHV3-19-201ENST00000521488 291 ntBASIC16.85■□□□□ 0.29
AP3S2P59780 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
AP3S2P59780 AC105233.4-201ENST00000642045 216 ntBASIC16.85■□□□□ 0.29
AP3S2P59780 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
AP3S2P59780 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S2P59780 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S2P59780 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3S2P59780 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
AP3S2P59780 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S2P59780 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
AP3S2P59780 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3S2P59780 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3S2P59780 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
AP3S2P59780 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3S2P59780 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S2P59780 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S2P59780 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
AP3S2P59780 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3S2P59780 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP3S2P59780 AC090164.3-201ENST00000610780 2143 ntBASIC16.84■□□□□ 0.29
AP3S2P59780 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3S2P59780 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 AC104581.1-202ENST00000635932 2618 ntBASIC16.84■□□□□ 0.29
AP3S2P59780 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP3S2P59780 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3S2P59780 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3S2P59780 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP3S2P59780 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3S2P59780 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3S2P59780 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3S2P59780 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S2P59780 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP3S2P59780 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP3S2P59780 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP3S2P59780 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3S2P59780 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP3S2P59780 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms