Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN20P56880 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN20P56880 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN20P56880 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN20P56880 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.98■□□□□ 0.47
CLDN20P56880 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN20P56880 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN20P56880 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 LETM1P2-201ENST00000597330 2178 ntBASIC17.98■□□□□ 0.47
CLDN20P56880 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN20P56880 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLDN20P56880 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN20P56880 AC124283.5-201ENST00000624661 1809 ntBASIC17.98■□□□□ 0.47
CLDN20P56880 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CLDN20P56880 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CLDN20P56880 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLDN20P56880 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN20P56880 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN20P56880 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CLDN20P56880 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN20P56880 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN20P56880 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN20P56880 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN20P56880 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN20P56880 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 AC069544.1-201ENST00000609399 999 ntBASIC17.97■□□□□ 0.47
CLDN20P56880 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN20P56880 AL512408.1-201ENST00000569378 2000 ntBASIC17.97■□□□□ 0.47
CLDN20P56880 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN20P56880 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN20P56880 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLDN20P56880 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN20P56880 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN20P56880 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
CLDN20P56880 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLDN20P56880 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CLDN20P56880 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN20P56880 RPS2P52-201ENST00000469610 820 ntBASIC17.96■□□□□ 0.47
CLDN20P56880 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN20P56880 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN20P56880 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.96■□□□□ 0.47
CLDN20P56880 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN20P56880 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN20P56880 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN20P56880 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN20P56880 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN20P56880 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN20P56880 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLDN20P56880 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLDN20P56880 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.96■□□□□ 0.46
CLDN20P56880 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CLDN20P56880 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN20P56880 AP000974.1-201ENST00000623909 2387 ntBASIC17.95■□□□□ 0.46
CLDN20P56880 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 AL162377.1-201ENST00000618844 1793 ntBASIC17.95■□□□□ 0.46
CLDN20P56880 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CLDN20P56880 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 AC098590.1-201ENST00000468126 897 ntBASIC17.95■□□□□ 0.46
CLDN20P56880 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN20P56880 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms