Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.88■□□□□ 0.61
CLDN6P56747 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.88■□□□□ 0.61
CLDN6P56747 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN6P56747 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLDN6P56747 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN6P56747 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLDN6P56747 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.88■□□□□ 0.61
CLDN6P56747 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN6P56747 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN6P56747 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN6P56747 AL137060.1-201ENST00000618151 2648 ntBASIC18.87■□□□□ 0.61
CLDN6P56747 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN6P56747 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.87■□□□□ 0.61
CLDN6P56747 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN6P56747 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN6P56747 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN6P56747 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLDN6P56747 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.87■□□□□ 0.61
CLDN6P56747 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.87■□□□□ 0.61
CLDN6P56747 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.87■□□□□ 0.61
CLDN6P56747 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
CLDN6P56747 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLDN6P56747 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN6P56747 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CLDN6P56747 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN6P56747 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CLDN6P56747 FP700111.2-201ENST00000619190 1892 ntBASIC18.86■□□□□ 0.61
CLDN6P56747 RCC2P6-201ENST00000526625 1557 ntBASIC18.86■□□□□ 0.61
CLDN6P56747 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN6P56747 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN6P56747 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN6P56747 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.86■□□□□ 0.61
CLDN6P56747 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN6P56747 AC011298.2-201ENST00000617989 482 ntBASIC18.86■□□□□ 0.61
CLDN6P56747 AC131212.4-201ENST00000623606 975 ntBASIC18.86■□□□□ 0.61
CLDN6P56747 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLDN6P56747 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN6P56747 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN6P56747 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN6P56747 TFP1-202ENST00000475455 1573 ntBASIC18.85■□□□□ 0.61
CLDN6P56747 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CLDN6P56747 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN6P56747 AC018553.1-201ENST00000616682 1458 ntBASIC18.85■□□□□ 0.61
CLDN6P56747 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN6P56747 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.85■□□□□ 0.61
CLDN6P56747 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 YBX1P2-201ENST00000489612 999 ntBASIC18.85■□□□□ 0.61
CLDN6P56747 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN6P56747 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN6P56747 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN6P56747 AC130371.2-201ENST00000619443 611 ntBASIC18.85■□□□□ 0.61
CLDN6P56747 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN6P56747 AL138966.2-201ENST00000621997 464 ntBASIC18.85■□□□□ 0.61
CLDN6P56747 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLDN6P56747 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLDN6P56747 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN6P56747 AC116351.2-201ENST00000606540 1585 ntBASIC18.85■□□□□ 0.61
CLDN6P56747 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN6P56747 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN6P56747 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.84■□□□□ 0.61
CLDN6P56747 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN6P56747 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN6P56747 RNF152P1-201ENST00000397754 604 ntBASIC18.84■□□□□ 0.61
CLDN6P56747 HMGA1P5-201ENST00000412453 271 ntBASIC18.84■□□□□ 0.61
CLDN6P56747 TPM4P1-201ENST00000436100 807 ntBASIC18.84■□□□□ 0.61
CLDN6P56747 MFAP1P1-201ENST00000442257 1255 ntBASIC18.84■□□□□ 0.61
CLDN6P56747 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN6P56747 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN6P56747 KRT18P16-201ENST00000510337 1294 ntBASIC18.84■□□□□ 0.61
CLDN6P56747 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms