Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SUMO3P55854 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.8■□□□□ 0.44
SUMO3P55854 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.8■□□□□ 0.44
SUMO3P55854 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.8■□□□□ 0.44
SUMO3P55854 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.8■□□□□ 0.44
SUMO3P55854 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.8■□□□□ 0.44
SUMO3P55854 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SUMO3P55854 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SUMO3P55854 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.8■□□□□ 0.44
SUMO3P55854 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SUMO3P55854 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.8■□□□□ 0.44
SUMO3P55854 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.8■□□□□ 0.44
SUMO3P55854 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.8■□□□□ 0.44
SUMO3P55854 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 AC125437.2-201ENST00000625180 2167 ntBASIC17.8■□□□□ 0.44
SUMO3P55854 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.8■□□□□ 0.44
SUMO3P55854 KRT8P8-201ENST00000434750 1448 ntBASIC17.8■□□□□ 0.44
SUMO3P55854 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.8■□□□□ 0.44
SUMO3P55854 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SUMO3P55854 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.79■□□□□ 0.44
SUMO3P55854 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SUMO3P55854 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
SUMO3P55854 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SUMO3P55854 KRT18P29-201ENST00000397031 1267 ntBASIC17.79■□□□□ 0.44
SUMO3P55854 KRASP1-201ENST00000407852 552 ntBASIC17.79■□□□□ 0.44
SUMO3P55854 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.79■□□□□ 0.44
SUMO3P55854 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.79■□□□□ 0.44
SUMO3P55854 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.79■□□□□ 0.44
SUMO3P55854 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.79■□□□□ 0.44
SUMO3P55854 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SUMO3P55854 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.79■□□□□ 0.44
SUMO3P55854 AC124016.1-201ENST00000609552 612 ntBASIC17.79■□□□□ 0.44
SUMO3P55854 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SUMO3P55854 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.79■□□□□ 0.44
SUMO3P55854 AL023875.1-201ENST00000640777 796 ntBASIC17.79■□□□□ 0.44
SUMO3P55854 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.79■□□□□ 0.44
SUMO3P55854 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SUMO3P55854 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.79■□□□□ 0.44
SUMO3P55854 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SUMO3P55854 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SUMO3P55854 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 PCDHAC2-203ENST00000615316 3011 ntBASIC17.78■□□□□ 0.44
SUMO3P55854 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SUMO3P55854 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SUMO3P55854 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.78■□□□□ 0.44
SUMO3P55854 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.78■□□□□ 0.44
SUMO3P55854 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.78■□□□□ 0.44
SUMO3P55854 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SUMO3P55854 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.78■□□□□ 0.44
SUMO3P55854 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.78■□□□□ 0.44
SUMO3P55854 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.78■□□□□ 0.44
SUMO3P55854 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.78■□□□□ 0.44
SUMO3P55854 AC110285.5-201ENST00000611501 352 ntBASIC17.78■□□□□ 0.44
SUMO3P55854 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.78■□□□□ 0.44
SUMO3P55854 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
SUMO3P55854 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SUMO3P55854 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SUMO3P55854 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SUMO3P55854 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SUMO3P55854 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SUMO3P55854 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SUMO3P55854 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SUMO3P55854 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SUMO3P55854 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms