Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
EPHA4P54764 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHA4P54764 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.92■□□□□ 0.62
EPHA4P54764 AC131212.4-201ENST00000623606 975 ntBASIC18.92■□□□□ 0.62
EPHA4P54764 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHA4P54764 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHA4P54764 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.92■□□□□ 0.62
EPHA4P54764 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.92■□□□□ 0.62
EPHA4P54764 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 AC079598.2-202ENST00000546624 1451 ntBASIC18.91■□□□□ 0.62
EPHA4P54764 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
EPHA4P54764 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHA4P54764 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.91■□□□□ 0.62
EPHA4P54764 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 AP005212.1-201ENST00000581547 1997 ntBASIC18.91■□□□□ 0.62
EPHA4P54764 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA4P54764 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA4P54764 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA4P54764 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHA4P54764 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.9■□□□□ 0.62
EPHA4P54764 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
EPHA4P54764 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA4P54764 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHA4P54764 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA4P54764 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA4P54764 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
EPHA4P54764 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA4P54764 AP000525.1-201ENST00000608286 694 ntBASIC18.9■□□□□ 0.62
EPHA4P54764 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.9■□□□□ 0.62
EPHA4P54764 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.9■□□□□ 0.62
EPHA4P54764 DGCR10-201ENST00000609839 495 ntBASIC18.9■□□□□ 0.62
EPHA4P54764 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHA4P54764 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHA4P54764 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHA4P54764 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
EPHA4P54764 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
EPHA4P54764 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EPHA4P54764 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHA4P54764 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 AC004980.1-204ENST00000429707 299 ntBASIC18.89■□□□□ 0.61
EPHA4P54764 FAM210CP-201ENST00000445714 574 ntBASIC18.89■□□□□ 0.61
EPHA4P54764 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHA4P54764 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHA4P54764 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHA4P54764 FITM1-202ENST00000559294 800 ntBASIC18.89■□□□□ 0.61
EPHA4P54764 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.89■□□□□ 0.61
EPHA4P54764 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.89■□□□□ 0.61
EPHA4P54764 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 KRT8P8-201ENST00000434750 1448 ntBASIC18.89■□□□□ 0.61
EPHA4P54764 AC073314.1-201ENST00000568729 2216 ntBASIC18.89■□□□□ 0.61
EPHA4P54764 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHA4P54764 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA4P54764 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EPHA4P54764 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHA4P54764 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHA4P54764 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.88■□□□□ 0.61
EPHA4P54764 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHA4P54764 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.88■□□□□ 0.61
EPHA4P54764 MIR6786-201ENST00000616843 113 ntBASIC18.88■□□□□ 0.61
EPHA4P54764 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.88■□□□□ 0.61
EPHA4P54764 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.88■□□□□ 0.61
EPHA4P54764 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EPHA4P54764 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHA4P54764 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA4P54764 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms